MGH Lab Publications
Featured Publications
Research
O’Neill, K., Shaw, R., Bolger, I., NYGC ALS Consortium, Tam, O.H., Phatnani, H., Gale Hammell, M. (2025) ALS molecular subtypes are a combination of cellular and pathological features learned by deep multiomics classifiers. Cell Rep. 44(3). pp. 115402.
Krupp, S, Hubbard, I, Tam, O, Gale Hammell, M, Dubnau, J. (2023) TDP-43 pathology in Drosophila induces glial-cell type specific toxicity that can be ameliorated by knock-down of SF2/SRSF1. PLoS Genet. 19:e1010973.
Tam, O. H., Rozhkov, N. V., Shaw, R., Kim, D., Hubbard, I., Fennessey, S., Propp, N., Fagegaltier, D., Harris, B. T., Ostrow, L. W., Phatnani, H., Ravits, J., Dubnau, J. , Gale Hammell, M. (2019) Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia. Cell Rep, 29(5) pp. 1164-1177.e5.
Ho, Y. J., Anaparthy, N., Molik, D., Mathew, G., Aicher, T., Patel, A., Hicks, J., Gale Hammell, M. (2018) Single-cell RNA-seq analysis identifies markers of resistance to targeted BRAF inhibitors in melanoma cell populations. Genome Res, 28 (9). pp. 1353-1363.
Jin, Y., Tam, O. H., Paniagua, E., Hammell, M. (2015) TEtranscripts: A package for including transposable elements in differential expression analysis of RNA-seq datasets. Bioinformatics, 31 (22). pp. 3593-3599.
Reviews
Rupert, D.D., Nowlan, A.C., Tam, O. H. , Gale Hammell, M. (2020) Ten Simple Rules for Running a Successful women-in-STEM Organization on an Academic Campus. PLoS Comput Biol, 16(5) pp. e1007754.
O'Neill, K., Brocks, D. , Gale Hammell, M. (2020) Mobile Genomics: Tools and Techniques for Tackling Transposons. Philos Trans R Soc Lond B Biol Sci, 375(1795)
Bourque, G., Burns, K. H., Gehring, M., Gorbunova, V., Seluanov, A., Hammell, M., Imbeault, M., Izsvak, Z., Levin, H. L., Macfarlan, T. S., Mager, D. L., Feschotte, C. (2018) Ten things you should know about transposable elements. Genome Biol, 19 p. 199.